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Mettu_2320 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2320" - RNA polymerase, sigma-24 subunit, ECF subfamily in Methylobacter tundripaludum
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2320RNA polymerase, sigma-24 subunit, ECF subfamily (172 aa)    
Predicted Functional Partners:
Mettu_2319
Anti-FecI sigma factor, FecR (326 aa)
 
 
  0.991
Mettu_4277
Anti-FecI sigma factor, FecR (325 aa)
 
 
  0.958
Mettu_1536
Anti-FecI sigma factor, FecR (319 aa)
 
 
  0.958
Mettu_2321
Putative uncharacterized protein (73 aa)
              0.859
rpoC
Transcriptase subunit beta’ ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1397 aa)
       
 
  0.690
Mettu_2322
Putative uncharacterized protein (108 aa)
              0.658
Mettu_2274
Serine O-acetyltransferase (311 aa)
 
          0.557
Mettu_3377
Positive regulator of sigma E, RseC/MucC (145 aa)
   
   
  0.530
Mettu_2301
Multi-sensor signal transduction histidine kinase (1161 aa)
     
 
  0.514
Mettu_0292
L-aspartate oxidase ; Catalyzes the oxidation of L-aspartate to iminoaspartate (531 aa)
         
  0.496
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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