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Mettu_2320 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2320" - KEGG: xau:Xaut_2777 ECF subfamily RNA polymerase sigma-24 factor in Methylobacter tundripaludum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
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Experiments
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[Homology]
Score
Mettu_2320KEGG- xau-Xaut_2777 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM- RNA polymerase sigma-70; PFAM- RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 (172 aa)    
Predicted Functional Partners:
Mettu_2319
Anti-FecI sigma factor, FecR; PFAM- FecR protein; KEGG- neu-NE0555 transmembrane sensor (326 aa)
 
  0.972
Mettu_4277
Anti-FecI sigma factor, FecR; PFAM- FecR protein; KEGG- nde-NIDE3525 putative iron dicitrate transmembrane sensor FecR (325 aa)
 
  0.923
Mettu_1536
Anti-FecI sigma factor, FecR; PFAM- FecR protein; KEGG- nde-NIDE2174 ferric citrate sensor FecR (319 aa)
 
  0.923
Mettu_2321
annotation not available (73 aa)
              0.845
Mettu_1238
Flagellar rod assembly protein/muramidase FlgJ; TIGRFAM- Flagellar protein FlgJ type-2; PFAM- Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; Flagellar protein FlgJ, N-terminal; KEGG- sse-Ssed_3079 flagellar rod assembly protein/muramidase FlgJ; SMART- Lysozyme subfamily 2 (366 aa)
       
      0.717
rpoC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1397 aa)
   
 
  0.651
Mettu_3279
Protein-glutamate methylesterase; SMART- MCP methyltransferase, CheR-type; PAS; PAC motif; TIGRFAM- PAS; KEGG- geo-Geob_3789 MCP methyltransferase/methylesterase, CheR/CheB with PAS/PAC sensor; PFAM- Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; MCP methyltransferase, CheR-type; PAS fold-3 (976 aa)
       
 
  0.648
Mettu_4224
Protein-glutamate methylesterase; PFAM- Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; MCP methyltransferase, CheR-type; KEGG- mag-amb3654 hypothetical protein; SMART- MCP methyltransferase, CheR-type (976 aa)
     
 
  0.647
Mettu_2322
annotation not available (108 aa)
              0.621
Mettu_3655
SMART- ATPase, AAA+ type, core; TIGRFAM- Flagellar protein export ATPase, FliI; ATPase, type III secretion system, FliI/YscN; KEGG- tgr-Tgr7_1966 flagellar biosynthesis/type III secretory pathway ATPase, FliI/YscN; PFAM- ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain (454 aa)
       
 
  0.616
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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