STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW23563.1KEGG: maq:Maqu_2584 major facilitator superfamily transporter; manually curated; PFAM: Major facilitator superfamily MFS-1; manually curated; KEGG: mmw:Mmwyl1_3590 argininosuccinate lyase; PFAM: Fumarate lyase; Argininosuccinate lyase. (416 aa)    
Predicted Functional Partners:
EGW20005.1
TIGRFAM: Amino acid adenylation; KEGG: npu:Npun_CR072 amino acid adenylation domain-containing protein; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding.
  
 
 0.874
EGW20554.1
TIGRFAM: Amino acid adenylation; KEGG: npu:Npun_R3425 beta-ketoacyl synthase; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; Acyl transferase; Polyketide synthase, KR; Thioesterase; overlaps another CDS with the same product name.
  
 
 0.735
EGW19716.1
KEGG: alv:Alvin_2084 chorismate mutase; TIGRFAM: Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain; PFAM: Prephenate dehydratase; Chorismate mutase, type II; Amino acid-binding ACT.
  
 
 0.689
EGW20568.1
TIGRFAM: Amino acid adenylation; KEGG: non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase/ligase; Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; Acyl transferase; Phosphopantetheine-binding; Aminotransferase class-III; Luciferase-like, subgroup; Condensation domain.
  
 
 0.603
EGW20553.1
KEGG: npu:Npun_F2183 amino acid adenylation domain-containing protein; TIGRFAM: Amino acid adenylation; Non-ribosomal peptide synthase; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Methyltransferase type 12; Phosphopantetheine-binding; overlaps another CDS with the same product name.
  
 
 0.587
EGW23561.1
PFAM: Nitrite/sulphite reductase 4Fe-4S region; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; KEGG: mca:MCA2059 nitrite/sulfite reductase protein.
    
  0.523
EGW20692.1
Acyl-(acyl-carrier-protein)--phospholipid O-acyltransferase; PFAM: AMP-dependent synthetase/ligase; Phospholipid/glycerol acyltransferase; KEGG: nhl:Nhal_2321 AMP-dependent synthetase and ligase; SMART: Phospholipid/glycerol acyltransferase.
  
 
 0.521
EGW22366.1
Nitrate reductase; KEGG: hch:HCH_05823 anaerobic dehydrogenase; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Molydopterin dinucleotide-binding region; BFD-like [2Fe-2S]-binding region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
     
 0.520
EGW20556.1
Long-chain-fatty-acid--(acyl-carrier-protein) ligase., 6-deoxyerythronolide-B synthase; KEGG: amino acid adenylation domain-containing protein; PFAM: Beta-ketoacyl synthase, N-terminal; AMP-dependent synthetase/ligase; Polyketide synthase, KR; Phosphopantetheine-binding; Beta-ketoacyl synthase, C-terminal; Acyl transferase.
  
 
 0.504
EGW20002.1
TIGRFAM: Amino acid adenylation; KEGG: bbe:BBR47_39840 non-ribosomal synthetase; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Methyltransferase type 12; Phosphopantetheine-binding; Thioesterase; overlaps another CDS with the same product name.
  
 
 0.490
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.