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Mettu_2448 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2448" - YcfA family protein in Methylobacter tundripaludum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2448YcfA family protein; PFAM- YcfA-like; KEGG- cph-Cpha266_1441 YcfA family protein (70 aa)    
Predicted Functional Partners:
Mettu_2447
PFAM- Uncharacterised protein family UPF0150; KEGG- cph-Cpha266_1440 hypothetical protein (68 aa)
     
 
  0.945
Mettu_0360
Integrase family protein; PFAM- Integrase, catalytic core, phage; KEGG- mei-Msip34_2844 integrase family protein; Belongs to the ’phage’ integrase family (381 aa)
     
 
  0.692
Mettu_3822
PFAM- Uncharacterised protein family UPF0150; KEGG- dma-DMR_05930 hypothetical protein (138 aa)
     
 
  0.656
Mettu_2279
PFAM- Uncharacterised protein family UPF0150; KEGG- nwa-Nwat_0072 hypothetical protein (70 aa)
     
 
  0.656
Mettu_0811
PFAM- Uncharacterised protein family UPF0150; KEGG- cyh-Cyan8802_4509 protein of unknown function UPF0150 (67 aa)
     
 
  0.656
Mettu_1079
PFAM- Transposase, IS4-like; KEGG- sru-SRU_0853 ISSru4, transposase (296 aa)
              0.402
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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