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rlmH protein (Methylobacter tundripaludum) - STRING interaction network
"rlmH" - rRNA in Methylobacter tundripaludum
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
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rlmHrRNA (pseudouridine-N3-)-methyltransferase RlmH ; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA (155 aa)    
Predicted Functional Partners:
Mettu_2466
Ribonuclease, Rne/Rng family (484 aa)
              0.883
Mettu_2465
Maf-like protein Mettu_2465 (191 aa)
              0.883
rsfS
Ribosomal silencing factor RsfS ; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation (117 aa)
   
   
  0.794
rplU
50S ribosomal protein L21 ; This protein binds to 23S rRNA in the presence of protein L20 (103 aa)
 
     
  0.625
trmL
tRNA (cytidine/uridine-2’-O-)-methyltransferase TrmL ; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2’-OH of the wobble nucleotide (158 aa)
   
   
  0.623
Mettu_2463
Putative uncharacterized protein (214 aa)
              0.619
Mettu_1393
Penicillin-binding protein 2 (612 aa)
   
        0.615
prmA
Ribosomal protein L11 methyltransferase ; Methylates ribosomal protein L11 (292 aa)
 
     
  0.595
nudH
(Di)nucleoside polyphosphate hydrolase ; Accelerates the degradation of transcripts by removing pyrophosphate from the 5’-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage (182 aa)
 
          0.576
rlmB
23S rRNA Gm2251 2’-O-methyltransferase ; Specifically methylates the ribose of guanosine 2251 in 23S rRNA (248 aa)
 
   
  0.576
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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