STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW23734.1KEGG: alv:Alvin_2068 putative signal transduction protein; PFAM: Metal-dependent hydrolase HDOD; SMART: GAF. (513 aa)    
Predicted Functional Partners:
EGW19789.1
Putative signal transduction protein; PFAM: Metal-dependent hydrolase HDOD; KEGG: nwa:Nwat_0678 putative signal transduction protein.
  
     0.767
EGW23592.1
PFAM: Metal-dependent hydrolase HDOD; Cyclic nucleotide-binding; KEGG: hch:HCH_05853 signal transduction protein.
  
     0.766
EGW22183.1
Putative signal transduction protein; PFAM: Metal-dependent hydrolase HDOD; KEGG: hch:HCH_05853 signal transduction protein.
  
     0.764
EGW20112.1
Putative signal transduction protein; PFAM: Metal-dependent hydrolase HDOD; KEGG: gpb:HDN1F_13910 predicted signal transduction protein.
  
     0.761
EGW20922.1
PFAM: Type IV pilus assembly PilZ; KEGG: dak:DaAHT2_1202 type IV pilus assembly PilZ.
  
     0.741
EGW23825.1
KEGG: alv:Alvin_0819 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; Tetratricopeptide TPR-1; SMART: Signal transduction response regulator, receiver region; Tetratricopeptide repeat.
 
     0.711
EGW20442.1
Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
     0.660
EGW19658.1
PFAM: Sulphate transporter/antisigma-factor antagonist STAS; KEGG: dar:Daro_1141 sulfate transporter/antisigma-factor antagonist STAS.
  
     0.639
EGW19656.1
Hypothetical protein; KEGG: pst:PSPTO_0916 methyl-accepting chemotaxis protein, putative.
  
     0.623
EGW20515.1
KEGG: pmy:Pmen_2828 PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS.
  
     0.616
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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