STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW19674.1Hypothetical protein. (143 aa)    
Predicted Functional Partners:
EGW19673.1
Magnesium chelatase; PFAM: von Willebrand factor, type A; Magnesium chelatase, ChlI subunit; KEGG: hse:Hsero_2656 Mg-chelatase subunit ChlI protein; SMART: von Willebrand factor, type A; ATPase, AAA+ type, core.
       0.773
EGW19675.1
TIGRFAM: Cobaltochelatase, CobN subunit; KEGG: hse:Hsero_2657 cobalamin biosynthesis protein; PFAM: CobN/magnesium chelatase.
       0.773
EGW19676.1
KEGG: rsl:RPSI07_mp0511 ferredoxin protein.
       0.686
EGW19677.1
Cobalt transporter, subunit CbtA; KEGG: hse:Hsero_2658 integral membrane protein; TIGRFAM: Cobalt transporter subunit CbtA, putative; PFAM: Cobalt transporter subunit CbtA, putative.
       0.686
EGW19678.1
Cobalt transporter, subunit CbtB; KEGG: hse:Hsero_2659 hypothetical protein; TIGRFAM: Cobalt transporter subunit CbtB, putative; PFAM: Cobalt transporter subunit CbtB, putative.
       0.686
EGW19671.1
KEGG: hse:Hsero_2654 precorrin-8X methylmutase; PFAM: Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase, core; Cobalamin (vitamin B12) biosynthesis CbiX.
       0.515
EGW19672.1
Precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; KEGG: hse:Hsero_2655 precorrin-6y methylase methyltransferase; TIGRFAM: Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase, core; PFAM: Tetrapyrrole methylase.
       0.515
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.