STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW19730.1KEGG: eba:ebA6677 hypothetical protein. (444 aa)    
Predicted Functional Partners:
EGW20312.1
PFAM: Protein of unknown function DUF403, bacteria; KEGG: tgr:Tgr7_1013 protein of unknown function DUF403.
  
  
 0.635
EGW20317.1
PFAM: Protein of unknown function DUF404, bacteria N-terminal; Protein of unknown function DUF407; Protein of unknown function DUF403, bacteria; KEGG: meh:M301_0028 protein of unknown function DUF404.
  
  
 0.635
EGW20137.1
KEGG: mca:MCA1677 glutamine synthetase, type I; TIGRFAM: Glutamine synthetase type I; PFAM: Glutamine synthetase, catalytic region; Glutamine synthetase, beta-Grasp.
  
  
  0.504
EGW19934.1
Gamma-glutamyltransferase; TIGRFAM: Gamma-glutamyltranspeptidase; KEGG: mca:MCA2148 gamma-glutamyltranspeptidase; PFAM: Gamma-glutamyltranspeptidase.
    
  0.424
EGW22449.1
KEGG: gca:Galf_1039 pyridoxal-dependent decarboxylase; PFAM: Pyridoxal phosphate-dependent decarboxylase.
    
  0.415
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.