STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW19749.1Transposase family protein; Manually curated; KEGG: app:CAP2UW1_1226 transposase family protein. (401 aa)    
Predicted Functional Partners:
EGW22371.1
KEGG: pfo:Pfl01_1998 hypothetical protein.
  
     0.725
EGW23448.1
Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold-3; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; KEGG: npu:Npun_F5467 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAC motif; PAS.
  
     0.632
EGW23449.1
Multi-sensor signal transduction histidine kinase; TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; PAS fold-3; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; KEGG: cyt:cce_1878 two-component sensor histidine kinase; SMART: ATP-binding region, ATPase-like; PAS; PAC motif; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region.
  
     0.610
EGW21370.1
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
  
    0.555
EGW23151.1
KEGG: shm:Shewmr7_1787 type III restriction enzyme, res subunit; PFAM: Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; SMART: DEAD-like helicase, N-terminal.
  
    0.555
EGW19795.1
PFAM: Putative helicase A859L; KEGG: dat:HRM2_20610 hypothetical protein.
  
    0.555
EGW22310.1
Transposase; Manually curated; KEGG: amr:AM1_2664 hypothetical protein.
  
     0.546
EGW22334.1
Transposase; Manually curated; KEGG: amr:AM1_6286 hypothetical protein.
  
     0.543
EGW21368.1
PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: dol:Dole_0249 restriction modification system DNA specificity subunit.
  
    0.538
EGW23150.1
KEGG: sli:Slin_6260 restriction modification system DNA specificity domain protein.
  
    0.538
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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