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Mettu_2957 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_2957" - PFAM: VacJ-like lipoprotein in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_2957PFAM- VacJ-like lipoprotein; KEGG- mca-MCA2076 VacJ lipoprotein (297 aa)    
Predicted Functional Partners:
Mettu_2744
PFAM- Toluene tolerance; KEGG- mca-MCA2792 hypothetical protein (215 aa)
 
 
  0.888
Mettu_2541
PFAM- Toluene tolerance; KEGG- mca-MCA2792 hypothetical protein (214 aa)
 
 
  0.887
Mettu_0713
KEGG- nmu-Nmul_A2559 toluene tolerance; TIGRFAM- Hopanoid biosynthesis-associated membrane protein HpnM; PFAM- Toluene tolerance (205 aa)
 
 
  0.792
Mettu_0181
PFAM- Mammalian cell entry related; KEGG- nwa-Nwat_0304 mammalian cell entry related domain-containing protein (155 aa)
 
     
  0.722
Mettu_2958
Penicillin-insensitive murein endopeptidase; Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus (279 aa)
              0.685
Mettu_3167
KEGG- mca-MCA0672 putative lipoprotein (214 aa)
     
 
  0.607
mtgA
Biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family (257 aa)
              0.573
Mettu_2955
PFAM- Alpha/beta hydrolase fold-1; KEGG- mca-MCA1033 hypothetical protein (330 aa)
 
          0.519
mrdA
Peptidoglycan D,D-transpeptidase MrdA; Catalyzes cross-linking of the peptidoglycan cell wall; Belongs to the transpeptidase family. MrdA subfamily (612 aa)
   
        0.487
Mettu_0183
Sulfate-transporting ATPase; PFAM- ABC transporter-like; KEGG- mca-MCA1969 ABC transporter, ATP-binding protein; SMART- ATPase, AAA+ type, core (275 aa)
 
 
 
  0.461
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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