STRINGSTRING
lolD protein (Methylobacter tundripaludum) - STRING interaction network
"lolD" - Lipoprotein-releasing system ATP-binding protein LolD in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lolDLipoprotein-releasing system ATP-binding protein LolD ; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner (226 aa)    
Predicted Functional Partners:
Mettu_3004
Lipoprotein releasing system, transmembrane protein, LolC/E family (415 aa)
 
  0.999
macB
Macrolide export ATP-binding/permease protein MacB ; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides (651 aa)
 
0.974
Mettu_3744
Phosphonate-transporting ATPase (226 aa)
 
 
0.944
Mettu_4275
Phosphonate-transporting ATPase (219 aa)
 
 
0.944
Mettu_3743
Putative uncharacterized protein (407 aa)
  0.929
Mettu_4274
Putative uncharacterized protein (398 aa)
  0.926
Mettu_3678
Xenobiotic-transporting ATPase (584 aa)
 
0.923
Mettu_3364
Xenobiotic-transporting ATPase (612 aa)
 
0.920
msbA
Lipid A export ATP-binding/permease protein MsbA ; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation (597 aa)
 
0.916
ccmA
Heme exporter protein A ; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system (207 aa)
   
 
0.911
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (19%) [HD]