STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
EGW20030.1Putative signal transduction protein; KEGG: dar:Daro_1978 HDIG; TIGRFAM: HDIG; PFAM: Metal-dependent hydrolase HDOD. (272 aa)    
Predicted Functional Partners:
EGW20029.1
Putative PAS/PAC sensor protein; KEGG: slt:Slit_1299 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; PAS fold; SMART: Signal transduction response regulator, receiver region.
  
  0.873
EGW20031.1
PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: Haemerythrin-like, metal-binding; PAS; PFAM: ATP-binding region, ATPase-like; PAS fold-3; Haemerythrin/HHE cation-binding motif; KEGG: rfr:Rfer_1978 PAS/PAC sensor signal transduction histidine kinase; SMART: ATP-binding region, ATPase-like; PAC motif; PAS; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region.
 
     0.730
EGW20032.1
KEGG: slt:Slit_1301 response regulator receiver modulated metal dependent phosphohydrolase; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region.
  
  0.716
EGW22400.1
Multi-sensor hybrid histidine kinase; KEGG: dat:HRM2_43550 putative two-component system sensor protein; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, phosphotransfer (Hpt) region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; Signal transduction response regulator, receiver region.
 
 
 0.669
EGW23709.1
TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: pmy:Pmen_1842 diguanylate cyclase; SMART: Diguanylate cyclase, predicted.
 
   
  0.620
EGW19694.1
TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: hse:Hsero_4138 GGDEF domain-containing protein; SMART: Diguanylate cyclase, predicted.
 
   
  0.589
EGW20830.1
TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: gca:Galf_2226 diguanylate cyclase with PAS/PAC sensor; SMART: Diguanylate cyclase, predicted.
 
   
  0.567
EGW21868.1
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-3; Signal transduction response regulator, receiver region; PAS fold; Signal transduction histidine kinase, phosphotransfer (Hpt) region; KEGG: tmz:Tmz1t_2831 multi-sensor hybrid histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; Signal transduction response regulator, receiver region; PAS; PAC motif.
 
 
   0.533
EGW22740.1
TIGRFAM: Diguanylate cyclase, predicted; PAS; PFAM: Diguanylate cyclase, predicted; PAS fold; Signal transduction response regulator, receiver region; KEGG: app:CAP2UW1_2559 response regulator receiver modulated diguanylate cyclase with PAS/PAC sensor; SMART: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; PAS; PAC motif.
  
  0.493
EGW22869.1
Multi-sensor hybrid histidine kinase; TIGRFAM: PAS; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-4; HAMP linker domain; PAS fold-3; PAS fold; Signal transduction response regulator, receiver region; KEGG: PAS/PAC sensor hybrid histidine kinase; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; PAC motif; Signal transduction response regulator, receiver region.
   
   0.487
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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