STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW20085.1Conserved repeat domain protein; TIGRFAM: Protein of unknown function DUF11; PFAM: Protein of unknown function DUF11; KEGG: har:HEAR1945 putative mannose-sensitive agglutinin (MSHA) biogenesis protein MshQ (pilus type IV); putative signal peptide; SMART: LamG-like jellyroll fold. (1696 aa)    
Predicted Functional Partners:
EGW20089.1
KEGG: tgr:Tgr7_3265 type II secretory pathway pseudopilin PulG.
 
     0.835
EGW20090.1
Hypothetical protein; Manually curated; KEGG: tbd:Tbd_0756 hypothetical protein.
 
     0.827
EGW20293.1
baaA2; KEGG: baaA2; trimeric autotransporter adhesin.
    
 0.818
EGW23202.1
PFAM: Peptidase S8/S53, subtilisin/kexin/sedolisin; KEGG: sth:STH718 bacillopeptidase-like protein.
 
 0.776
EGW21521.1
KEGG: mba:Mbar_A0261 hypothetical protein.
    
   0.774
EGW20759.1
KEGG: mba:Mbar_B3754 hypothetical protein; PFAM: PKD; Fibronectin, type III; SMART: LamG-like jellyroll fold; PKD.
    
  0.764
EGW22546.1
KEGG: MshA biogenesis protein, MshJ-like protein.
 
     0.762
EGW22544.1
KEGG: pca:Pcar_0381 MshA biogenesis protein MshI-1.
 
     0.757
EGW22548.1
PFAM: Type II/III secretion system; Secretin, N-terminal; Secretin/TonB, short N-terminal; KEGG: sbm:Shew185_0484 pilus (MSHA type) biogenesis protein MshL.
 
  
 0.756
EGW20095.1
KEGG: mmb:Mmol_1195 general secretion pathway protein H.
 
     0.756
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.