STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW20162.1Hypothetical protein; Manually curated; KEGG: ebi:EbC_15990 putative lipoprotein. (188 aa)    
Predicted Functional Partners:
EGW20160.1
PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; KEGG: pfo:Pfl01_0424 hypothetical protein.
 
     0.946
EGW20161.1
KEGG: pen:PSEEN0348 3-oxoacyl-(acyl carrier protein) synthase I; PFAM: Beta-ketoacyl synthase, C-terminal; Beta-ketoacyl synthase, N-terminal; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
 
     0.911
EGW20171.1
PFAM: AMP-dependent synthetase/ligase; Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; KEGG: pfo:Pfl01_0436 AMP-dependent synthetase and ligase.
 
     0.860
EGW20165.1
Outer membrane lipoprotein carrier protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
 
     0.853
EGW20172.1
KEGG: rme:Rmet_4380 hypothetical protein.
 
     0.846
EGW20166.1
PFAM: Thioesterase superfamily; KEGG: hse:Hsero_3710 4-hydroxybenzoyl-CoA thioesterase.
 
     0.834
EGW20164.1
KEGG: vvu:VV1_0056 exporter.
 
     0.833
EGW20176.1
KEGG: smt:Smal_3925 hypothetical protein.
 
     0.819
acpP-2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
 
     0.809
EGW20170.1
KEGG: spe:Spro_0895 glycosyl transferase family protein; manually curated; PFAM: Glycosyl transferase, family 2.
 
     0.802
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.