STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW20204.1PFAM: LRV FeS4 cluster; Leucine rich repeat variant; KEGG: ttu:TERTU_1543 leucine rich repeat domain protein. (255 aa)    
Predicted Functional Partners:
EGW20203.1
KEGG: alv:Alvin_1875 hypothetical protein.
 
     0.942
EGW20200.1
KEGG: psa:PST_1329 nitrogen fixation protein; TIGRFAM: NifT/FixU; PFAM: NifT/FixU.
 
    0.928
EGW20202.1
Nitrogen fixation protein NifX; KEGG: alv:Alvin_1876 dinitrogenase iron-molybdenum cofactor biosynthesis protein; TIGRFAM: Nitrogen fixation protein NifX; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis.
 
    0.913
EGW20196.1
KEGG: dar:Daro_1418 hypothetical protein.
 
    0.810
EGW20205.1
KEGG: mca:MCA2833 hypothetical protein.
       0.783
EGW20255.1
KEGG: slt:Slit_0809 hypothetical protein.
 
     0.781
EGW20201.1
PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: azo:azo0542 FdxN protein.
       0.769
nifW
Nitrogenase-stabilizing/protective protein nifW; May protect the nitrogenase Fe-Mo protein from oxidative damage; Belongs to the NifW family.
  
    0.752
EGW20217.1
Nitrogen fixation protein; KEGG: avn:Avin_01490 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0460; PFAM: Uncharacterised protein family UPF0460.
 
    0.751
EGW20199.1
Nitrogenase molybdenum-iron protein beta chain; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.
 
     0.743
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.