STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW20218.1Protein of unknown function DUF683; PFAM: Uncharacterised protein family UPF0437; KEGG: azo:azo0557 hypothetical protein. (70 aa)    
Predicted Functional Partners:
EGW20217.1
Nitrogen fixation protein; KEGG: avn:Avin_01490 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0460; PFAM: Uncharacterised protein family UPF0460.
  
  
 0.797
EGW20219.1
KEGG: alv:Alvin_0908 ferredoxin III, nif-specific; TIGRFAM: Ferredoxin III 4[4Fe-4S], nif-specific; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup.
       0.765
EGW20222.1
KEGG: dar:Daro_1511 hypothetical protein.
       0.509
EGW20221.1
KEGG: mca:MCA0257 hypothetical protein.
     
 0.502
EGW20223.1
PFAM: Protein of unknown function DUF364; KEGG: mca:MCA2834 hypothetical protein.
       0.487
EGW20220.1
Sucraseferredoxin family protein; PFAM: Sucraseferredoxin-like; KEGG: azo:azo3368 ferredoxin 2Fe-2S protein.
       0.481
EGW20216.1
PFAM: Transposase, IS4-like; KEGG: cli:Clim_1571 transposase IS4 family protein.
       0.416
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.