STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW20287.1PFAM: Ferredoxin; KEGG: mca:MCA0760 ferredoxin, 2Fe-2S. (95 aa)    
Predicted Functional Partners:
EGW20289.1
NifQ family protein; PFAM: NifQ; KEGG: alv:Alvin_3043 NifQ family protein.
 
 0.978
nuoC
NAD(P)H-quinone oxidoreductase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.
  
 
 0.978
EGW20566.1
6-deoxyerythronolide-B synthase., NADPH:quinone reductase; KEGG: cyt:cce_3079 polyketide synthase; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; Acyl transferase; Methyltransferase type 12; Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding; Polyketide synthase, KR; Phosphopantetheine-binding.
   
 0.974
EGW20645.1
PFAM: Oxidoreductase FAD/NAD(P)-binding; KEGG: mca:MCA0335 hypothetical protein.
  
 0.966
EGW22690.1
KEGG: mca:MCA2724 NAD-reducing hydrogenase, alpha subunit; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; NADH:ubiquinone oxidoreductase, 24kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding.
  
 
 0.955
EGW20284.1
PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; KEGG: app:CAP2UW1_4423 4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
 
 0.951
EGW20560.1
KEGG: npu:Npun_R2082 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; Acyl transferase; Polyketide synthase, KR; Phosphopantetheine-binding.
  
 0.950
EGW21963.1
TIGRFAM: Glutamate synthase, NADH/NADPH, small subunit 1; KEGG: mca:MCA2040 glutamate synthase subunit beta; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase.
    
 0.946
EGW20561.1
Manually curated; KEGG: npu:Npun_R2081 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal.
   
 0.945
EGW20569.1
KEGG: npu:Npun_R3425 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; Acyl transferase; Short-chain dehydrogenase/reductase SDR; Phosphopantetheine-binding.
   
 0.945
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.