STRINGSTRING
Mettu_3418 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3418" - Ferredoxin in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3418Ferredoxin (95 aa)    
Predicted Functional Partners:
Mettu_3419
Ferredoxin (116 aa)
 
          0.918
Mettu_3417
Flavodoxin/nitric oxide synthase (427 aa)
 
          0.915
Mettu_3420
NifQ family protein (191 aa)
 
          0.773
Mettu_3326
Putative uncharacterized protein (279 aa)
   
          0.773
Mettu_3416
Nitrogenase-associated protein (140 aa)
              0.769
Mettu_3408
PAS/PAC sensor signal transduction histidine kinase (538 aa)
   
          0.747
Mettu_3415
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (92 aa)
              0.744
Mettu_3358
Dinitrogenase iron-molybdenum cofactor biosynthesis protein (237 aa)
 
          0.736
Mettu_3383
NifZ family protein (159 aa)
 
          0.658
Mettu_3330
Nitrogen fixation protein FixT (74 aa)
   
          0.567
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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