STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW20358.1PFAM: Protein of unknown function DUF482; KEGG: hch:HCH_00354 hypothetical protein. (378 aa)    
Predicted Functional Partners:
EGW20359.1
PFAM: Protein of unknown function DUF938; KEGG: hypothetical protein.
 
     0.762
EGW20357.1
Hypothetical protein.
       0.661
EGW20356.1
KEGG: nhl:Nhal_2556 hypothetical protein.
       0.524
EGW20360.1
Hypothetical protein.
       0.472
bpt
arginyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.
 
     0.450
EGW20844.1
PFAM: Glutathione S-transferase, C-terminal; Glutathione S-transferase, N-terminal; KEGG: lbf:LBF_2202 glutathione transferase.
  
     0.425
EGW21139.1
PFAM: Protein of unknown function DUF938; KEGG: nhl:Nhal_3059 protein of unknown function DUF938.
 
     0.409
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.