• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mettu_3503 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3503" - KEGG: gme:Gmet_1666 RND efflux system, outer membrane lipoprotein, NodT in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3503KEGG- gme-Gmet_1666 RND efflux system, outer membrane lipoprotein, NodT; TIGRFAM- RND efflux system, outer membrane lipoprotein, NodT; PFAM- Outer membrane efflux protein (526 aa)    
Predicted Functional Partners:
Mettu_3504
Efflux transporter, RND family, MFP subunit; KEGG- mca-MCA1361 HlyD family secretion protein; TIGRFAM- Secretion protein HlyD; PFAM- Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (457 aa)
 
  0.965
Mettu_3505
Efflux pump membrane transporter; KEGG- mca-MCA1360 hydrophobe/amphiphile efflux-1 (HAE1) family protein; TIGRFAM- Hydrophobe/amphiphile efflux-1 HAE1; PFAM- Acriflavin resistance protein (1039 aa)
  0.954
Mettu_0196
Efflux transporter, RND family, MFP subunit; KEGG- mca-MCA1596 HlyD family multidrug efflux protein; TIGRFAM- Secretion protein HlyD; PFAM- Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (425 aa)
 
  0.836
Mettu_3716
KEGG- bph-Bphy_5503 RND family efflux transporter MFP subunit; TIGRFAM- Secretion protein HlyD; PFAM- Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (383 aa)
  0.822
Mettu_0195
Efflux pump membrane transporter; KEGG- noc-Noc_1827 hydrophobe/amphiphile efflux-1 HAE1; TIGRFAM- Hydrophobe/amphiphile efflux-1 HAE1; PFAM- Acriflavin resistance protein (1066 aa)
  0.787
macB
Macrolide export ATP-binding/permease protein MacB; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides (651 aa)
   
  0.765
Mettu_3717
KEGG- reh-H16_A3356 cation/multidrug efflux pump; TIGRFAM- Hydrophobe/amphiphile efflux-1 HAE1; PFAM- Acriflavin resistance protein (1045 aa)
  0.755
Mettu_1576
Outer membrane adhesin like proteiin; TIGRFAM- VCBS repeat domain; PFAM- Putative Ig; KEGG- cch-Cag_1242 VCBS; SMART- Dystroglycan-type cadherin-like (6210 aa)
   
 
  0.705
Mettu_2236
KEGG- rpf-Rpic12D_4296 efflux transporter, RND family, MFP subunit; TIGRFAM- Secretion protein HlyD; PFAM- Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (421 aa)
 
  0.695
Mettu_3439
KEGG- nhl-Nhal_1688 efflux transporter, RND family, MFP subunit; TIGRFAM- Secretion protein HlyD; PFAM- Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family (488 aa)
   
  0.692
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (9%) [HD]