STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW20432.1KEGG: rpf:Rpic12D_0206 DNA-cytosine methyltransferase; TIGRFAM: DNA methylase, C-5 cytosine-specific; PFAM: DNA methylase, C-5 cytosine-specific. (359 aa)    
Predicted Functional Partners:
EGW20429.1
DNA mismatch endonuclease Vsr; May nick specific sequences that contain T:G mispairs resulting from m5C-deamination.
   
 0.978
metK
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
    
 0.860
EGW21916.1
KEGG: mca:MCA0811 phosphorylase family protein; TIGRFAM: Hopanoid-associated phosphorylase HpnG; PFAM: Nucleoside phosphorylase.
    
  0.830
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
     
 0.778
ahcY-2
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.
     
 0.778
EGW23270.1
KEGG: wch:wcw_0149 hypothetical protein.
    
  0.775
EGW21236.1
PFAM: DNA methylase, C-5 cytosine-specific; KEGG: mea:Mex_2p0039 hypothetical protein.
  
     0.715
EGW23362.1
KEGG: rva:Rvan_2743 membrane-bound metal-dependent hydrolase.
   
    0.535
EGW22655.1
Acyl-homoserine-lactone synthase; KEGG: afr:AFE_1999 autoinducer synthesis protein; PFAM: Autoinducer synthesis protein.
     
 0.509
EGW22952.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.
     
 0.508
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.