STRINGSTRING
Mettu_3567 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3567" - Cytosine-specific methyltransferase in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3567Cytosine-specific methyltransferase (359 aa)    
Predicted Functional Partners:
Mettu_3563
DNA mismatch endonuclease Vsr (142 aa)
   
  0.979
metK
Methionine adenosyltransferase ; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme (386 aa)
       
  0.884
Mettu_4037
S-adenosyl-L-homocysteine hydrolase ; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine (420 aa)
       
    0.882
Mettu_1620
S-adenosyl-L-homocysteine hydrolase ; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine (430 aa)
       
    0.882
Mettu_4401
C-5 cytosine-specific DNA methylase (247 aa)
   
   
    0.800
Mettu_1953
DNA polymerase III subunit beta ; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The beta chain is required for initiation of replication once it is clamped onto DNA, it slides freely (bidirectional and ATP- independent) along duplex DNA (366 aa)
   
 
  0.727
Mettu_0915
Histone deacetylase superfamily (310 aa)
     
  0.655
rapA
ATP-dependent helicase HepA ; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair (938 aa)
   
  0.652
Mettu_2681
SNF2-related protein (1083 aa)
   
  0.652
Mettu_1918
A/G-specific adenine glycosylase (349 aa)
   
      0.602
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (20%) [HD]