STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW20564.1Amino acid adenylation domain protein; PFAM: AMP-dependent synthetase/ligase; Polyketide synthase, KR; Acyl transferase; Phosphopantetheine-binding; Condensation domain; Male sterility, NAD-binding; manually curated; KEGG: sco:SCO3230 CDA peptide synthetase I; TIGRFAM: Amino acid adenylation; Non-ribosomal peptide synthase; Thioester reductase. (7729 aa)    
Predicted Functional Partners:
EGW20004.1
TIGRFAM: Amino acid adenylation; Non-ribosomal peptide synthase; KEGG: npu:Npun_R3023 amino acid adenylation domain-containing protein; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; overlaps another CDS with the same product name.
 
0.999
EGW20005.1
TIGRFAM: Amino acid adenylation; KEGG: npu:Npun_CR072 amino acid adenylation domain-containing protein; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding.
 
0.999
EGW20553.1
KEGG: npu:Npun_F2183 amino acid adenylation domain-containing protein; TIGRFAM: Amino acid adenylation; Non-ribosomal peptide synthase; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Methyltransferase type 12; Phosphopantetheine-binding; overlaps another CDS with the same product name.
 
0.999
EGW20554.1
TIGRFAM: Amino acid adenylation; KEGG: npu:Npun_R3425 beta-ketoacyl synthase; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; Acyl transferase; Polyketide synthase, KR; Thioesterase; overlaps another CDS with the same product name.
 
0.999
EGW20556.1
Long-chain-fatty-acid--(acyl-carrier-protein) ligase., 6-deoxyerythronolide-B synthase; KEGG: amino acid adenylation domain-containing protein; PFAM: Beta-ketoacyl synthase, N-terminal; AMP-dependent synthetase/ligase; Polyketide synthase, KR; Phosphopantetheine-binding; Beta-ketoacyl synthase, C-terminal; Acyl transferase.
 
0.999
EGW20558.1
PFAM: MbtH-like protein; KEGG: ami:Amir_3672 MbtH domain protein.
 
 0.999
EGW20560.1
KEGG: npu:Npun_R2082 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; Acyl transferase; Polyketide synthase, KR; Phosphopantetheine-binding.
 
0.999
EGW20561.1
Manually curated; KEGG: npu:Npun_R2081 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal.
 0.999
EGW20565.1
PFAM: MbtH-like protein; KEGG: sgr:SGR_452 putative MbtH-like protein.
 
 0.999
EGW20566.1
6-deoxyerythronolide-B synthase., NADPH:quinone reductase; KEGG: cyt:cce_3079 polyketide synthase; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; Acyl transferase; Methyltransferase type 12; Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, zinc-binding; Polyketide synthase, KR; Phosphopantetheine-binding.
 
0.999
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.