STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW20569.1KEGG: npu:Npun_R3425 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; Acyl transferase; Short-chain dehydrogenase/reductase SDR; Phosphopantetheine-binding. (1529 aa)    
Predicted Functional Partners:
EGW22027.1
TIGRFAM: Malonyl CoA-acyl carrier protein transacylase; KEGG: mca:MCA2002 malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase.
  
0.999
EGW20002.1
TIGRFAM: Amino acid adenylation; KEGG: bbe:BBR47_39840 non-ribosomal synthetase; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Methyltransferase type 12; Phosphopantetheine-binding; Thioesterase; overlaps another CDS with the same product name.
0.999
EGW20003.1
TIGRFAM: Amino acid adenylation; KEGG: psb:Psyr_3722 amino acid adenylation; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; overlaps another CDS with the same product name.
0.999
EGW20004.1
TIGRFAM: Amino acid adenylation; Non-ribosomal peptide synthase; KEGG: npu:Npun_R3023 amino acid adenylation domain-containing protein; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; overlaps another CDS with the same product name.
0.999
EGW20005.1
TIGRFAM: Amino acid adenylation; KEGG: npu:Npun_CR072 amino acid adenylation domain-containing protein; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding.
 
0.999
EGW20007.1
TIGRFAM: Amino acid adenylation; KEGG: ava:Ava_C0009 amino acid adenylation; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding.
0.999
EGW20553.1
KEGG: npu:Npun_F2183 amino acid adenylation domain-containing protein; TIGRFAM: Amino acid adenylation; Non-ribosomal peptide synthase; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Methyltransferase type 12; Phosphopantetheine-binding; overlaps another CDS with the same product name.
 
0.999
EGW20554.1
TIGRFAM: Amino acid adenylation; KEGG: npu:Npun_R3425 beta-ketoacyl synthase; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; Acyl transferase; Polyketide synthase, KR; Thioesterase; overlaps another CDS with the same product name.
 
0.999
EGW20556.1
Long-chain-fatty-acid--(acyl-carrier-protein) ligase., 6-deoxyerythronolide-B synthase; KEGG: amino acid adenylation domain-containing protein; PFAM: Beta-ketoacyl synthase, N-terminal; AMP-dependent synthetase/ligase; Polyketide synthase, KR; Phosphopantetheine-binding; Beta-ketoacyl synthase, C-terminal; Acyl transferase.
 
0.999
EGW20563.1
Amino acid adenylation domain protein; PFAM: AMP-dependent synthetase/ligase; Phosphopantetheine-binding; manually curated; KEGG: gdi:GDI_2833 putative nonribosomal peptide synthetases (NPRS); TIGRFAM: Amino acid adenylation.
0.999
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.