STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW20682.1Hypothetical protein. (49 aa)    
Predicted Functional Partners:
EGW20683.1
PFAM: Carbonic anhydrase; KEGG: nhl:Nhal_3058 carbonic anhydrase.
       0.658
EGW20680.1
KEGG: mca:MCA1131 hypothetical protein; TIGRFAM: NGG1p interacting factor 3, NIF3; PFAM: NGG1p interacting factor 3, NIF3.
       0.548
EGW20681.1
PFAM: NUDIX hydrolase domain; KEGG: ote:Oter_2376 NUDIX hydrolase.
       0.548
EGW20684.1
PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: azl:AZL_c04930 transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.438
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.