STRINGSTRING
Mettu_3890 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3890" - Acetyltransferase in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3890Acetyltransferase (213 aa)    
Predicted Functional Partners:
Mettu_3889
Glutamine--scyllo-inositol transaminase (372 aa)
   
 
  0.951
Mettu_1279
DegT/DnrJ/EryC1/StrS aminotransferase (382 aa)
 
 
  0.916
Mettu_3888
Oxidoreductase domain protein (347 aa)
   
   
  0.903
Mettu_1278
UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing (393 aa)
 
 
  0.902
Mettu_3892
Glutamine--scyllo-inositol transaminase (398 aa)
 
 
  0.893
Mettu_3891
UDP-glucose 4-epimerase (324 aa)
 
   
  0.817
Mettu_3516
Capsular exopolysaccharide family (790 aa)
 
   
  0.813
Mettu_2532
Glutamine--scyllo-inositol transaminase (370 aa)
   
 
  0.766
Mettu_1796
DegT/DnrJ/EryC1/StrS aminotransferase (538 aa)
   
 
  0.766
Mettu_1784
DegT/DnrJ/EryC1/StrS aminotransferase (371 aa)
   
 
  0.766
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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