STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW20741.1Acetyltransferase; KEGG: rsh:Rsph17029_3702 acetyltransferase. (213 aa)    
Predicted Functional Partners:
EGW20740.1
KEGG: lch:Lcho_1398 glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  0.860
EGW20739.1
Oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: lch:Lcho_1397 oxidoreductase domain-containing protein.
 
     0.827
EGW22439.1
TIGRFAM: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: mca:MCA0397 UDP-N-acetylglucosamine acyltransferase; PFAM: Bacterial transferase hexapeptide repeat.
  
 0.815
lpxA
Acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.
  
 0.815
EGW21450.1
TIGRFAM: YD repeat; KEGG: rsl:RPSI07_3221 conserved exported protein of unknown function, putative rhs-related protein.
   
    0.774
EGW19698.1
KEGG: see:SNSL254_p_0173 rhs family protein; TIGRFAM: RHS repeat-associated core domain; YD repeat; PFAM: YD repeat.
   
    0.774
EGW20738.1
KEGG: cyc:PCC7424_5772 transferase hexapeptide repeat containing protein.
 
  
 0.765
EGW20742.1
UDP-glucose 4-epimerase; KEGG: lch:Lcho_1394 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase.
 
  
 0.764
EGW20743.1
KEGG: cyj:Cyan7822_5727 glutamine--scyllo-inositol transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
  0.764
EGW22465.1
PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: ddf:DEFDS_0368 aminotransferase DegT/DnrJ/EryC1/StrS family; Belongs to the DegT/DnrJ/EryC1 family.
 
  0.733
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.