• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mettu_3890 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3890" - Acetyltransferase in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3890Acetyltransferase; KEGG- rsh-Rsph17029_3702 acetyltransferase (213 aa)    
Predicted Functional Partners:
Mettu_1278
UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing; KEGG- tdn-Suden_0597 UDP-N-acetylglucosamine 2-epimerase; TIGRFAM- UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing; PFAM- UDP-N-acetylglucosamine 2-epimerase (393 aa)
 
   
  0.876
Mettu_3889
KEGG- lch-Lcho_1398 glutamine--scyllo-inositol transaminase; PFAM- DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family (372 aa)
   
  0.862
Mettu_3888
Oxidoreductase domain protein; PFAM- Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG- lch-Lcho_1397 oxidoreductase domain-containing protein (347 aa)
 
     
  0.844
Mettu_1281
KEGG- cbl-CLK_2102 N-acylneuraminate cytidylyltransferase (CMP-N-acetylneuraminic acid synthetase) (CMP-NeuNAc synthetase); PFAM- Acylneuraminate cytidylyltransferase (234 aa)
 
   
  0.819
Mettu_1279
PFAM- DegT/DnrJ/EryC1/StrS aminotransferase; KEGG- ddf-DEFDS_0368 aminotransferase DegT/DnrJ/EryC1/StrS family; Belongs to the DegT/DnrJ/EryC1 family (382 aa)
   
  0.741
Mettu_3891
UDP-glucose 4-epimerase; KEGG- lch-Lcho_1394 NAD-dependent epimerase/dehydratase; PFAM- NAD-dependent epimerase/dehydratase (324 aa)
 
   
  0.697
Mettu_3892
KEGG- cyj-Cyan7822_5727 glutamine--scyllo-inositol transaminase; PFAM- DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family (398 aa)
   
  0.693
Mettu_1275
Mannose-1-phosphate guanylyltransferase; KEGG- hch-HCH_04833 nucleoside-diphosphate-sugar pyrophosphorylase; PFAM- Nucleotidyl transferase; Cystathionine beta-synthase, core (350 aa)
 
 
  0.632
Mettu_3887
KEGG- cyc-PCC7424_5772 transferase hexapeptide repeat containing protein (168 aa)
 
          0.626
Mettu_1277
TIGRFAM- N-acetylneuraminate synthase; KEGG- vsa-VSAL_I0254 N-acetylneuraminic acid synthase; PFAM- N-acetylneuraminic acid synthase, N-terminal (366 aa)
 
     
  0.599
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (14%) [HD]
STRING is part of the ELIXIR infrastructure: it is one of ELIXIR's Core Data Resources.  Learn more >