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Mettu_3935 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3935" - PFAM: Secretion protein HlyD in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3935PFAM- Secretion protein HlyD; KEGG- mca-MCA2257 HlyD family secretion protein (338 aa)    
Predicted Functional Partners:
Mettu_3934
KEGG- mca-MCA2258 EmrB/QacA family drug resistance transporter; TIGRFAM- Drug resistance transporter EmrB/QacA subfamily; PFAM- Major facilitator superfamily MFS-1 (521 aa)
 
  0.978
Mettu_2945
Drug resistance transporter, EmrB/QacA subfamily; KEGG- nde-NIDE3241 putative multidrug resistance protein B; TIGRFAM- Drug resistance transporter EmrB/QacA subfamily; PFAM- Major facilitator superfamily MFS-1 (549 aa)
 
  0.853
Mettu_1459
Major facilitator superfamily MFS_1; KEGG- sde-Sde_3490 EmrB/QacA family drug resistance transporter; manually curated; PFAM- Major facilitator superfamily MFS-1 (513 aa)
 
  0.852
Mettu_2122
Drug resistance transporter, EmrB/QacA subfamily; KEGG- nde-NIDE3241 putative multidrug resistance protein B; TIGRFAM- Drug resistance transporter EmrB/QacA subfamily; PFAM- Major facilitator superfamily MFS-1 (531 aa)
 
  0.847
Mettu_2121
KEGG- nde-NIDE3240 putative multidrug resistance outer membrane protein; TIGRFAM- RND efflux system, outer membrane lipoprotein, NodT; PFAM- Outer membrane efflux protein (512 aa)
  0.693
Mettu_4063
KEGG- mca-MCA1277 outer membrane protein TolC, putative; TIGRFAM- Type I secretion outer membrane protein, TolC; PFAM- Outer membrane efflux protein (449 aa)
     
  0.684
Mettu_1453
KEGG- mmb-Mmol_0046 type I secretion outer membrane protein, TolC family; TIGRFAM- Type I secretion outer membrane protein, TolC; PFAM- Outer membrane efflux protein (451 aa)
     
  0.684
Mettu_3937
PFAM- Outer membrane efflux protein; KEGG- pol-Bpro_5561 outer membrane efflux protein (425 aa)
 
  0.669
Mettu_2944
KEGG- min-Minf_0900 outer membrane component of tripartite multidrug resistance system; TIGRFAM- RND efflux system, outer membrane lipoprotein, NodT; PFAM- Outer membrane efflux protein (489 aa)
  0.668
Mettu_0194
KEGG- cak-Caul_1086 RND efflux system outer membrane lipoprotein; TIGRFAM- RND efflux system, outer membrane lipoprotein, NodT; PFAM- Outer membrane efflux protein (497 aa)
 
  0.654
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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