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Mettu_3938 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_3938" - Secretion protein HlyD family protein in Methylobacter tundripaludum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_3938Secretion protein HlyD family protein (369 aa)    
Predicted Functional Partners:
Mettu_3939
Monosaccharide-transporting ATPase (654 aa)
 
        0.985
Mettu_3941
ABC-2 type transporter (384 aa)
 
        0.982
Mettu_3940
ABC-2 type transporter (384 aa)
 
        0.982
Mettu_3937
Outer membrane efflux protein (425 aa)
 
          0.934
Mettu_3936
Transcriptional regulator, TetR family (204 aa)
 
          0.812
Mettu_4326
Outer membrane efflux protein (465 aa)
 
          0.606
Mettu_3530
Protein CyaE ; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin) (509 aa)
 
          0.601
Mettu_3934
Drug resistance transporter, EmrB/QacA subfamily (521 aa)
 
          0.598
Mettu_4327
Efflux transporter, RND family, MFP subunit (361 aa)
   
          0.576
Mettu_0744
ABC transporter-like protein (309 aa)
   
        0.573
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum, M. tundripaludum SV96, Methylobacter, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum Wartiainen et al. 2006, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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