STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW20813.1Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: net:Neut_0974 ABC transporter-related protein; SMART: ATPase, AAA+ type, core. (237 aa)    
Predicted Functional Partners:
EGW21127.1
PFAM: Protein of unknown function DUF214, permase predicted; KEGG: rca:Rcas_2537 hypothetical protein.
  
 0.998
EGW20812.1
PFAM: Protein of unknown function DUF214, permase predicted; KEGG: net:Neut_0973 hypothetical protein.
 
 0.987
EGW21117.1
PFAM: Protein of unknown function DUF214, permase predicted; KEGG: nhl:Nhal_3357 protein of unknown function DUF214.
 0.984
EGW20597.1
PFAM: Protein of unknown function DUF214, permase predicted; KEGG: slt:Slit_1490 protein of unknown function DUF214.
 
 0.981
EGW19884.1
KEGG: mca:MCA2624 lipoprotein ABC transporter, permease protein LolE; TIGRFAM: Lipoprotein releasing system, transmembrane protein, LolC/E family; PFAM: Protein of unknown function DUF214, permase predicted.
 
 0.932
msbA
Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.
    
0.884
EGW20790.1
PFAM: ABC-2 type transporter; KEGG: dal:Dalk_5053 ABC-2 type transporter.
    
 0.848
EGW20814.1
PFAM: Secretion protein HlyD; KEGG: net:Neut_0975 secretion protein HlyD family protein.
 
 
 0.834
macB
Phosphonate-transporting ATPase; Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.
 
0.825
EGW23517.1
ABC transporter-like protein; KEGG: reh:H16_B2119 ABC-type transporter, ATPase component; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
  
 0.791
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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