• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Mettu_4091 protein (Methylobacter tundripaludum) - STRING interaction network
"Mettu_4091" - PFAM: Protein of unknown function DUF891 in Methylobacter tundripaludum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mettu_4091PFAM- Protein of unknown function DUF891; KEGG- cja-CJA_1213 hypothetical protein (115 aa)    
Predicted Functional Partners:
Mettu_4092
KEGG- nwa-Nwat_2421 hypothetical protein (94 aa)
 
   
  0.968
Mettu_0603
Transcriptional regulator, XRE family; KEGG- eba-ebB120 hypothetical protein; PFAM- Helix-turn-helix type 3; SMART- Helix-turn-helix type 3 (94 aa)
 
   
  0.798
Mettu_4090
PFAM- Glycosyl transferase, family 3, N-terminal; KEGG- hch-HCH_02544 hypothetical protein (342 aa)
              0.559
cyoE
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily (295 aa)
              0.559
Mettu_3628
KEGG- app-CAP2UW1_3238 PilT protein domain protein; TIGRFAM- Protein of unknown function DUF132; SMART- Nucleotide binding protein, PINc (139 aa)
   
          0.552
Mettu_2913
PFAM- Protein of unknown function DUF497; KEGG- glo-Glov_2221 protein of unknown function DUF497 (97 aa)
   
        0.500
Mettu_3627
KEGG- gpb-HDN1F_17230 hypothetical protein (74 aa)
   
          0.485
Mettu_2054
Putative transcription regulator with HTH domain; Manually curated; KEGG- slt-Slit_2794 transcriptional regulator, XRE family (135 aa)
 
        0.475
Mettu_1722
KEGG- gur-Gura_2272 hypothetical protein; manually curated; PFAM- Protein of unknown function DUF497 (94 aa)
   
        0.471
Mettu_4366
Transcriptional modulator of MazE/toxin, MazF; PFAM- PemK-like protein; KEGG- xac-XACa0027 plasmid stable inheritance protein K (110 aa)
   
          0.447
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
Server load: low (11%) [HD]