STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW20982.1KEGG: rva:Rvan_0969 hydrogenase assembly chaperone HypC/HupF; TIGRFAM: Hydrogenase expression/formation protein, HupF/HypC; PFAM: Hydrogenase expression/formation protein, HupF/HypC. (98 aa)    
Predicted Functional Partners:
EGW20971.1
KEGG: rva:Rvan_0978 hydrogenase expression/formation protein HypD; TIGRFAM: Hydrogenase formation HypD protein; PFAM: Hydrogenase formation HypD protein; Belongs to the HypD family.
  
 
 0.981
EGW20969.1
KEGG: alv:Alvin_2797 hydrogenase expression/formation protein HypE; TIGRFAM: Hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein.
  
 
 0.965
EGW20981.1
PFAM: Hydrogenase-1 expression HyaE; KEGG: tin:Tint_3080 hydrogenase-1 expression HyaE; Belongs to the HupG/HyaE family.
 
   
 0.962
EGW20983.1
KEGG: rva:Rvan_0968 hydrogenase expression/formation protein; TIGRFAM: Peptidase A31, hydrogenase expression/formation protein; Peptidase A31, hydrogen uptake protein; PFAM: Peptidase A31, hydrogen uptake protein.
 
  
 0.958
EGW20980.1
PFAM: HupH hydrogenase expression protein, C-terminal conserved region; KEGG: rva:Rvan_0971 HupH hydrogenase expression protein.
 
  
 0.924
EGW20986.1
KEGG: rva:Rvan_0965 nickel-dependent hydrogenase large subunit; PFAM: Nickel-dependent hydrogenase, large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 
 0.910
EGW20987.1
TIGRFAM: [Ni-Fe]-hydrogenase, small subunit; Twin-arginine translocation pathway, signal sequence; KEGG: reh:PHG001 membrane-bound [NiFe] hydrogenase small subunit; PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit.
 
 
 0.902
EGW20984.1
TIGRFAM: Nickel-dependent hydrogenase b-type cytochrome subunit; KEGG: rva:Rvan_0967 Ni/Fe-hydrogenase, b-type cytochrome subunit.
 
   
 0.900
EGW20979.1
PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: tin:Tint_3082 rubredoxin-type Fe(Cys)4 protein; Belongs to the rubredoxin family.
 
  
 0.885
EGW20978.1
Hypothetical protein; KEGG: azl:AZL_c01950 rubredoxin.
 
  
 0.870
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.