STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW21141.1PFAM: Protein of unknown function DUF1326; KEGG: nhl:Nhal_3068 protein of unknown function DUF1326. (202 aa)    
Predicted Functional Partners:
EGW21142.1
PFAM: Protein of unknown function DUF2182, transmembrane, metal-binding; KEGG: nhl:Nhal_3056 hypothetical protein.
 
     0.954
EGW21140.1
PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: nhl:Nhal_3057 short-chain dehydrogenase/reductase SDR.
 
     0.859
EGW21139.1
PFAM: Protein of unknown function DUF938; KEGG: nhl:Nhal_3059 protein of unknown function DUF938.
 
     0.672
EGW22717.1
KEGG: bwe:BcerKBAB4_1749 hypothetical protein.
  
     0.616
EGW21143.1
PFAM: YkuD domain; KEGG: mca:MCA0855 ErfK/YbiS/YcfS/YnhG family protein.
       0.613
EGW22720.1
PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; Secretin/TonB, short N-terminal; KEGG: ppd:Ppro_1266 TonB-dependent receptor.
  
     0.452
EGW22716.1
PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: gur:Gura_0778 TonB-dependent receptor.
  
     0.430
EGW23374.1
KEGG: azo:azo2364 hypothetical protein.
  
     0.426
EGW22921.1
KEGG: dae:Dtox_4336 hypothetical protein.
  
     0.410
EGW22718.1
PFAM: Radical SAM; KEGG: toc:Toce_0938 radical SAM domain protein.
  
     0.406
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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