STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EGW21242.1PFAM: Transposase IS3/IS911; KEGG: rms:RMA_0745 transposase. (124 aa)    
Predicted Functional Partners:
EGW21243.1
KEGG: net:Neut_2192 integrase catalytic subunit; manually curated; PFAM: Integrase, catalytic core.
  
 0.878
EGW20995.1
PFAM: Integrase, catalytic core; KEGG: net:Neut_2192 integrase catalytic subunit; overlaps another CDS with the same product name.
  
 0.615
EGW21735.1
KEGG: net:Neut_2192 integrase catalytic subunit; manually curated; PFAM: Integrase, catalytic core.
  
 0.607
Your Current Organism:
Methylobacter tundripaludum
NCBI taxonomy Id: 697282
Other names: M. tundripaludum SV96, Methylobacter sp. SV96, Methylobacter tundripaludum DSM 17260, Methylobacter tundripaludum SV96, Methylobacter tundripaludum str. SV96, Methylobacter tundripaludum strain SV96
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.