STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0J52_27342Uncharacterized protein. (663 aa)    
Predicted Functional Partners:
Cbp80
Nuclear cap-binding protein subunit 1.
    
 0.781
C0J52_17495
RRM domain-containing protein.
    
 0.772
C0J52_31487
Uncharacterized protein.
    
 0.730
SF3B1
Splicing factor 3B subunit 1.
   
 0.726
C0J52_11112
Uncharacterized protein.
    
 0.721
B52
Serine-arginine protein 55.
    
 0.721
ube2i
SUMO-conjugating enzyme UBC9; Belongs to the ubiquitin-conjugating enzyme family.
   
  0.712
C0J52_10357
PSP domain-containing protein.
   
 0.702
C0J52_14913
Uncharacterized protein.
   
 0.699
SmE
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 0.699
Your Current Organism:
Blattella germanica
NCBI taxonomy Id: 6973
Other names: B. germanica, German cockroach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.