C0J52_25191 protein (Blattella germanica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

C0J52_25191

E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates. (255 aa)

Predicted Functional Partners:

CACYBP

0.889

C0J52_27953

0.819

ebi

0.819

Tbl1xr1

0.819

ube2t

0.654

C0J52_06584

0.585

arm

0.466

USP5

0.464

Your Current Organism:

Blattella germanica

NCBI taxonomy Id: 6973
Other names: B. germanica, German cockroach

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C0J52_06584	C0J52_25191	A0A2P8YYY5	A0A2P8XKI3	Uncharacterized protein.	E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.	0.585
C0J52_06584	C0J52_27953	A0A2P8YYY5	A0A2P8XAL8	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.413
C0J52_06584	Tbl1xr1	A0A2P8YYY5	A0A2P8YV59	Uncharacterized protein.	F-box-like/WD repeat-containing protein TBL1XR1.	0.413
C0J52_06584	ebi	A0A2P8YYY5	A0A2P8XBC6	Uncharacterized protein.	F-box-like/WD repeat-containing protein ebi.	0.413
C0J52_25191	C0J52_06584	A0A2P8XKI3	A0A2P8YYY5	E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.	Uncharacterized protein.	0.585
C0J52_25191	C0J52_27953	A0A2P8XKI3	A0A2P8XAL8	E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.	WD_REPEATS_REGION domain-containing protein.	0.819
C0J52_25191	CACYBP	A0A2P8XKI3	A0A2P8YCA2	E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.	Calcyclin-binding protein.	0.889
C0J52_25191	Tbl1xr1	A0A2P8XKI3	A0A2P8YV59	E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.	F-box-like/WD repeat-containing protein TBL1XR1.	0.819
C0J52_25191	USP5	A0A2P8XKI3	A0A2P8YHU2	E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.	Ubiquitin carboxyl-terminal hydrolase.	0.464
C0J52_25191	arm	A0A2P8XKI3	A0A2P8XN70	E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.	Armadillo segment polarity protein.	0.466
C0J52_25191	ebi	A0A2P8XKI3	A0A2P8XBC6	E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.	F-box-like/WD repeat-containing protein ebi.	0.819
C0J52_25191	ube2t	A0A2P8XKI3	A0A2P8YJW0	E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.	Ubiquitin-conjugating enzyme E2 T; Belongs to the ubiquitin-conjugating enzyme family.	0.654
C0J52_27953	C0J52_06584	A0A2P8XAL8	A0A2P8YYY5	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.413
C0J52_27953	C0J52_25191	A0A2P8XAL8	A0A2P8XKI3	WD_REPEATS_REGION domain-containing protein.	E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.	0.819
C0J52_27953	arm	A0A2P8XAL8	A0A2P8XN70	WD_REPEATS_REGION domain-containing protein.	Armadillo segment polarity protein.	0.884
C0J52_27953	ube2t	A0A2P8XAL8	A0A2P8YJW0	WD_REPEATS_REGION domain-containing protein.	Ubiquitin-conjugating enzyme E2 T; Belongs to the ubiquitin-conjugating enzyme family.	0.413
CACYBP	C0J52_25191	A0A2P8YCA2	A0A2P8XKI3	Calcyclin-binding protein.	E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.	0.889
CACYBP	arm	A0A2P8YCA2	A0A2P8XN70	Calcyclin-binding protein.	Armadillo segment polarity protein.	0.714
Tbl1xr1	C0J52_06584	A0A2P8YV59	A0A2P8YYY5	F-box-like/WD repeat-containing protein TBL1XR1.	Uncharacterized protein.	0.413
Tbl1xr1	C0J52_25191	A0A2P8YV59	A0A2P8XKI3	F-box-like/WD repeat-containing protein TBL1XR1.	E3 ubiquitin-protein ligase; E3 ubiquitin-protein ligase that mediates ubiquitination and subsequent proteasomal degradation of target proteins. E3 ubiquitin ligases accept ubiquitin from an E2 ubiquitin-conjugating enzyme in the form of a thioester and then directly transfers the ubiquitin to targeted substrates.	0.819

page 1 of 2

Server load: low (26%) [HD]

Permalink

Network

Cooccurrence

Experiments

Coexpression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2024

Credits

Access

Info

About