Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C0J52_15797 | C0J52_15851 | A0A2P8YP37 | A0A2P8Y0J4 | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | Uncharacterized protein. | 0.998 |
C0J52_15797 | C0J52_16701 | A0A2P8YP37 | A0A2P8XJ66 | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | Uncharacterized protein. | 0.998 |
C0J52_15797 | C0J52_19502 | A0A2P8YP37 | A0A2P8XJT8 | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | Uncharacterized protein. | 0.999 |
C0J52_15797 | Ddx56 | A0A2P8YP37 | A0A2P8XYU9 | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | Putative ATP-dependent RNA helicase DDX56. | 0.988 |
C0J52_15797 | GRWD1_1 | A0A2P8YP37 | A0A2P8XN61 | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | Glutamate-rich WD repeat-containing protein 1. | 0.962 |
C0J52_15797 | Non3 | A0A2P8YP37 | A0A2P8Y1C7 | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | Ribosome production factor 2. | 0.998 |
C0J52_15797 | Ns1 | A0A2P8YP37 | A0A2P8Z4M7 | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | Guanine nucleotide-binding protein-like 3. | 0.999 |
C0J52_15797 | PWP1 | A0A2P8YP37 | A0A2P8XRC7 | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | Periodic tryptophan protein 1. | 0.950 |
C0J52_15797 | WDR36 | A0A2P8YP37 | A0A2P8XU64 | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | WD repeat-containing protein 36. | 0.969 |
C0J52_15797 | pit | A0A2P8YP37 | A0A2P8Z4J2 | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | RNA helicase. | 0.999 |
C0J52_15851 | C0J52_15797 | A0A2P8Y0J4 | A0A2P8YP37 | Uncharacterized protein. | Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. | 0.998 |
C0J52_15851 | C0J52_16701 | A0A2P8Y0J4 | A0A2P8XJ66 | Uncharacterized protein. | Uncharacterized protein. | 0.998 |
C0J52_15851 | C0J52_19502 | A0A2P8Y0J4 | A0A2P8XJT8 | Uncharacterized protein. | Uncharacterized protein. | 0.998 |
C0J52_15851 | Ddx56 | A0A2P8Y0J4 | A0A2P8XYU9 | Uncharacterized protein. | Putative ATP-dependent RNA helicase DDX56. | 0.937 |
C0J52_15851 | GRWD1_1 | A0A2P8Y0J4 | A0A2P8XN61 | Uncharacterized protein. | Glutamate-rich WD repeat-containing protein 1. | 0.946 |
C0J52_15851 | Non3 | A0A2P8Y0J4 | A0A2P8Y1C7 | Uncharacterized protein. | Ribosome production factor 2. | 0.998 |
C0J52_15851 | Ns1 | A0A2P8Y0J4 | A0A2P8Z4M7 | Uncharacterized protein. | Guanine nucleotide-binding protein-like 3. | 0.999 |
C0J52_15851 | PWP1 | A0A2P8Y0J4 | A0A2P8XRC7 | Uncharacterized protein. | Periodic tryptophan protein 1. | 0.978 |
C0J52_15851 | WDR36 | A0A2P8Y0J4 | A0A2P8XU64 | Uncharacterized protein. | WD repeat-containing protein 36. | 0.996 |
C0J52_15851 | pit | A0A2P8Y0J4 | A0A2P8Z4J2 | Uncharacterized protein. | RNA helicase. | 0.999 |
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