STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0J52_26228Uncharacterized protein. (315 aa)    
Predicted Functional Partners:
ERCC8
DNA excision repair protein ERCC-8.
    
 
 0.964
USP7
Ubiquitin carboxyl-terminal hydrolase 7; Belongs to the peptidase C19 family.
    
 0.925
C0J52_01199
Uncharacterized protein.
    
 
 0.896
C0J52_03484
CPSF_A domain-containing protein.
    
 
 0.852
C0J52_09622
Uncharacterized protein.
    
 
 0.790
wdr61
WD repeat-containing protein 61.
    
 
 0.774
Roc1a
RING-box protein 1A.
    
 
 0.729
Atu
Another transcription unit protein.
    
 
 0.723
ctr9
RNA polymerase-associated protein CTR9.
    
 
 0.723
RpII15
DNA-directed RNA polymerase II subunit RPB9.
    
 
 0.712
Your Current Organism:
Blattella germanica
NCBI taxonomy Id: 6973
Other names: B. germanica, German cockroach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.