Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C0J52_00843 | C0J52_13126 | A0A2P8Y1H0 | A0A2P8XQC0 | RRM domain-containing protein. | Uncharacterized protein. | 0.694 |
C0J52_00843 | PAN3 | A0A2P8Y1H0 | A0A2P8ZCI3 | RRM domain-containing protein. | PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] | 0.976 |
C0J52_04242 | C0J52_05051 | A0A2P8ZKG8 | A0A2P8XWY0 | RNB domain-containing protein. | Exonuclease domain-containing protein. | 0.578 |
C0J52_04242 | C0J52_13126 | A0A2P8ZKG8 | A0A2P8XQC0 | RNB domain-containing protein. | Uncharacterized protein. | 0.647 |
C0J52_04242 | EXOSC10 | A0A2P8ZKG8 | A0A2P8YHT9 | RNB domain-containing protein. | Exosome component 10. | 0.995 |
C0J52_04242 | PNPT1 | A0A2P8ZKG8 | A0A2P8YJ34 | RNB domain-containing protein. | Polyribonucleotide nucleotidyltransferase 1. | 0.929 |
C0J52_04242 | Pabpc1 | A0A2P8ZKG8 | A0A2P8YRQ4 | RNB domain-containing protein. | Polyadenylate-binding protein 1. | 0.552 |
C0J52_05051 | C0J52_04242 | A0A2P8XWY0 | A0A2P8ZKG8 | Exonuclease domain-containing protein. | RNB domain-containing protein. | 0.578 |
C0J52_05051 | C0J52_13126 | A0A2P8XWY0 | A0A2P8XQC0 | Exonuclease domain-containing protein. | Uncharacterized protein. | 0.874 |
C0J52_05051 | DIS3 | A0A2P8XWY0 | A0A2P8XI36 | Exonuclease domain-containing protein. | Exosome complex exonuclease RRP44. | 0.578 |
C0J52_05051 | EXOSC10 | A0A2P8XWY0 | A0A2P8YHT9 | Exonuclease domain-containing protein. | Exosome component 10. | 0.646 |
C0J52_05051 | PNPT1 | A0A2P8XWY0 | A0A2P8YJ34 | Exonuclease domain-containing protein. | Polyribonucleotide nucleotidyltransferase 1. | 0.585 |
C0J52_13126 | C0J52_00843 | A0A2P8XQC0 | A0A2P8Y1H0 | Uncharacterized protein. | RRM domain-containing protein. | 0.694 |
C0J52_13126 | C0J52_04242 | A0A2P8XQC0 | A0A2P8ZKG8 | Uncharacterized protein. | RNB domain-containing protein. | 0.647 |
C0J52_13126 | C0J52_05051 | A0A2P8XQC0 | A0A2P8XWY0 | Uncharacterized protein. | Exonuclease domain-containing protein. | 0.874 |
C0J52_13126 | DIS3 | A0A2P8XQC0 | A0A2P8XI36 | Uncharacterized protein. | Exosome complex exonuclease RRP44. | 0.647 |
C0J52_13126 | EXOSC10 | A0A2P8XQC0 | A0A2P8YHT9 | Uncharacterized protein. | Exosome component 10. | 0.627 |
C0J52_13126 | GMPS | A0A2P8XQC0 | A0A2P8Z5I9 | Uncharacterized protein. | GMP synthase [glutamine-hydrolyzing]. | 0.666 |
C0J52_13126 | PAN3 | A0A2P8XQC0 | A0A2P8ZCI3 | Uncharacterized protein. | PAN2-PAN3 deadenylation complex subunit PAN3; Regulatory subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in general and miRNA-mediated mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein (PABP). PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA deca [...] | 0.913 |
C0J52_13126 | PCNA | A0A2P8XQC0 | A0A2P8Y1H5 | Uncharacterized protein. | Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. | 0.872 |
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