Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C0J52_05362 | C0J52_06627 | A0A2P8Z331 | A0A2P8XU79 | UPF0061 protein. | SelT-like protein. | 0.539 |
C0J52_05362 | EEFSEC | A0A2P8Z331 | A0A2P8XUF5 | UPF0061 protein. | Selenocysteine-specific elongation factor. | 0.607 |
C0J52_05362 | MSRB3 | A0A2P8Z331 | A0A2P8ZLV0 | UPF0061 protein. | Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. | 0.663 |
C0J52_05362 | SELENOF | A0A2P8Z331 | A0A2P8ZNI4 | UPF0061 protein. | Selenoprotein F. | 0.571 |
C0J52_05362 | SELENOS | A0A2P8Z331 | A0A2P8Z4U1 | UPF0061 protein. | Selenoprotein S. | 0.554 |
C0J52_05362 | Selenoi | A0A2P8Z331 | A0A2P8Y586 | UPF0061 protein. | Ethanolaminephosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.553 |
C0J52_06627 | C0J52_05362 | A0A2P8XU79 | A0A2P8Z331 | SelT-like protein. | UPF0061 protein. | 0.539 |
C0J52_06627 | EEFSEC | A0A2P8XU79 | A0A2P8XUF5 | SelT-like protein. | Selenocysteine-specific elongation factor. | 0.538 |
C0J52_06627 | MSRB3 | A0A2P8XU79 | A0A2P8ZLV0 | SelT-like protein. | Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. | 0.468 |
C0J52_06627 | Mien1 | A0A2P8XU79 | A0A2P8XN98 | SelT-like protein. | Migration and invasion enhancer 1. | 0.410 |
C0J52_06627 | SELENOF | A0A2P8XU79 | A0A2P8ZNI4 | SelT-like protein. | Selenoprotein F. | 0.571 |
C0J52_06627 | SELENOS | A0A2P8XU79 | A0A2P8Z4U1 | SelT-like protein. | Selenoprotein S. | 0.472 |
C0J52_06627 | Selenoi | A0A2P8XU79 | A0A2P8Y586 | SelT-like protein. | Ethanolaminephosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.429 |
EEFSEC | C0J52_05362 | A0A2P8XUF5 | A0A2P8Z331 | Selenocysteine-specific elongation factor. | UPF0061 protein. | 0.607 |
EEFSEC | C0J52_06627 | A0A2P8XUF5 | A0A2P8XU79 | Selenocysteine-specific elongation factor. | SelT-like protein. | 0.538 |
EEFSEC | SELENOF | A0A2P8XUF5 | A0A2P8ZNI4 | Selenocysteine-specific elongation factor. | Selenoprotein F. | 0.547 |
EEFSEC | SELENOS | A0A2P8XUF5 | A0A2P8Z4U1 | Selenocysteine-specific elongation factor. | Selenoprotein S. | 0.538 |
EEFSEC | Selenoi | A0A2P8XUF5 | A0A2P8Y586 | Selenocysteine-specific elongation factor. | Ethanolaminephosphotransferase 1; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.463 |
MSRB3 | C0J52_05362 | A0A2P8ZLV0 | A0A2P8Z331 | Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. | UPF0061 protein. | 0.663 |
MSRB3 | C0J52_06627 | A0A2P8ZLV0 | A0A2P8XU79 | Peptide-methionine (R)-S-oxide reductase; Methionine-sulfoxide reductase that specifically reduces methionine (R)-sulfoxide back to methionine. While in many cases methionine oxidation is the result of random oxidation following oxidative stress, methionine oxidation is also a post-translational modification that takes place on specific residues. | SelT-like protein. | 0.468 |
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