STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DDX5_0Putative ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family. (449 aa)    
Predicted Functional Partners:
C0J52_19405
Pescadillo.
   
 0.930
DDX5_1
Putative ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family.
  
  
 
0.901
Ddx17_0
Putative ATP-dependent RNA helicase DDX17; Belongs to the DEAD box helicase family.
  
  
 
0.900
Ns1
Guanine nucleotide-binding protein-like 3.
  
 0.864
C0J52_15797
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 0.862
C0J52_00023
Ribosome biogenesis protein WDR12 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat WDR12/YTM1 family.
   
 0.853
C0J52_14644
Uncharacterized protein.
    
 0.847
SF3B1
Splicing factor 3B subunit 1.
   
 0.845
C0J52_09378
Putative rRNA-processing protein EBP2.
   
 0.841
Alyref
THO complex subunit 4.
   
 0.832
Your Current Organism:
Blattella germanica
NCBI taxonomy Id: 6973
Other names: B. germanica, German cockroach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.