STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNIP1Smad nuclear-interacting protein 1. (460 aa)    
Predicted Functional Partners:
C0J52_09854
RRM domain-containing protein.
   
 0.998
BUD13
BUD13 protein.
   
 0.996
C0J52_16837
Uncharacterized protein.
   
 
 0.992
C0J52_08958
Uncharacterized protein.
   
 0.992
l(3)72Ab
Putative U5 small nuclear ribonucleoprotein 200 kDa helicase.
   
 
 0.991
Bx42
Puff-specific protein Bx42.
    
 
 0.988
SF3B1
Splicing factor 3B subunit 1.
    
 
 0.978
Phf5a
PHD finger-like domain-containing protein 5A.
    
 
 0.977
C0J52_18068
Uncharacterized protein.
   
 
 0.971
SNRPB2
U2 small nuclear ribonucleoprotein B.
    
  0.968
Your Current Organism:
Blattella germanica
NCBI taxonomy Id: 6973
Other names: B. germanica, German cockroach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.