STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0J52_15849Uncharacterized protein. (948 aa)    
Predicted Functional Partners:
C0J52_07559
Uncharacterized protein.
    
 0.990
C0J52_20684
Sen15 domain-containing protein.
    
 0.970
C0J52_19369
tRNA_int_endo domain-containing protein.
   
 0.905
Cpsf160
Cleavage and polyadenylation specificity factor subunit 1.
     
 0.625
CPSF1
Cleavage and polyadenylation specificity factor subunit 1.
     
 0.625
TRMT2A
tRNA (Uracil-5-)-methyltransferase A; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
   
    0.592
trmt2b
tRNA (Uracil(54)-C(5))-methyltransferase-B; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
   
    0.592
C0J52_10513
Uncharacterized protein.
   
    0.592
C0J52_04012
Methyltranfer_dom domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
   
    0.592
cpsf4
Cleavage and polyadenylation specificity factor subunit 4.
   
 
  0.584
Your Current Organism:
Blattella germanica
NCBI taxonomy Id: 6973
Other names: B. germanica, German cockroach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.