STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COL21A1Collagen alpha-1(XXI) chain. (579 aa)    
Predicted Functional Partners:
COL4A1
Collagen alpha-1(IV) chain.
 
 
0.980
C0J52_00628
Integrin_alpha2 domain-containing protein.
    
 0.902
C0J52_00626
Integrin_alpha2 domain-containing protein; Belongs to the integrin alpha chain family.
    
 0.902
emb-9
Collagen alpha-1(IV) chain.
  
0.856
CO4A2
Collagen alpha-2(IV) chain.
  
0.854
mys_0
Integrin beta; Belongs to the integrin beta chain family.
    
 0.837
mys_1
Integrin beta.
    
 0.837
C0J52_02631
EGF_2 domain-containing protein.
    
 0.837
Col6a4
Collagen alpha-4(VI) chain.
   
 0.823
pla2g4a
Phospholipase A2.
     
 0.783
Your Current Organism:
Blattella germanica
NCBI taxonomy Id: 6973
Other names: B. germanica, German cockroach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.