STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0J52_10355Ribosomal RNA processing protein 36. (228 aa)    
Predicted Functional Partners:
C0J52_25151
Uncharacterized protein.
   
 
 0.997
dbe_1
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.996
diexf
Digestive organ expansion factor.
   
 0.996
C0J52_14763
WD_REPEATS_REGION domain-containing protein.
   
 0.995
C0J52_19058
Uncharacterized protein.
   
 0.991
C0J52_05510
WD_REPEATS_REGION domain-containing protein; Belongs to the NDK family.
   
 0.990
Ddx10
Putative ATP-dependent RNA helicase DDX10; Belongs to the DEAD box helicase family.
   
 0.989
C0J52_23722
MIF4G domain-containing protein.
   
 
 0.981
csnk2b
Casein kinase II subunit beta; Plays a complex role in regulating the basal catalytic activity of the alpha subunit; Belongs to the casein kinase 2 subunit beta family.
    
  0.976
bys
Bystin.
   
 
 0.976
Your Current Organism:
Blattella germanica
NCBI taxonomy Id: 6973
Other names: B. germanica, German cockroach
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