C0J52_07190 protein (Blattella germanica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

C0J52_07190

Uncharacterized protein. (218 aa)

Predicted Functional Partners:

C0J52_13786

0.999

C0J52_06655

0.993

SAMM50

0.988

Tomm20

0.988

C0J52_12064

0.988

C0J52_11507

0.978

C0J52_03408

0.976

C0J52_15525

0.960

C0J52_03585

0.960

timm23

0.956

Your Current Organism:

Blattella germanica

NCBI taxonomy Id: 6973
Other names: B. germanica, German cockroach

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C0J52_03408	C0J52_03585	A0A2P8YVN5	A0A2P8YVF5	Uncharacterized protein.	Uncharacterized protein.	0.870
C0J52_03408	C0J52_07190	A0A2P8YVN5	A0A2P8Y954	Uncharacterized protein.	Uncharacterized protein.	0.976
C0J52_03408	C0J52_11507	A0A2P8YVN5	A0A2P8XTL1	Uncharacterized protein.	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.702
C0J52_03408	C0J52_12064	A0A2P8YVN5	A0A2P8YPF6	Uncharacterized protein.	Uncharacterized protein.	0.870
C0J52_03408	C0J52_13786	A0A2P8YVN5	A0A2P8YNB3	Uncharacterized protein.	Uncharacterized protein.	0.980
C0J52_03408	C0J52_15525	A0A2P8YVN5	A0A2P8XTA7	Uncharacterized protein.	Uncharacterized protein.	0.870
C0J52_03408	SAMM50	A0A2P8YVN5	A0A2P8Y8G2	Uncharacterized protein.	Sorting and assembly machinery component 50.	0.623
C0J52_03408	Tomm20	A0A2P8YVN5	A0A2P8YGQ4	Uncharacterized protein.	Mitochondrial import receptor subunit TOM20.	0.870
C0J52_03408	timm23	A0A2P8YVN5	A0A2P8YW01	Uncharacterized protein.	Mitochondrial import inner membrane translocase subunit Tim23.	0.628
C0J52_03585	C0J52_03408	A0A2P8YVF5	A0A2P8YVN5	Uncharacterized protein.	Uncharacterized protein.	0.870
C0J52_03585	C0J52_06655	A0A2P8YVF5	A0A2P8Z114	Uncharacterized protein.	Uncharacterized protein.	0.870
C0J52_03585	C0J52_07190	A0A2P8YVF5	A0A2P8Y954	Uncharacterized protein.	Uncharacterized protein.	0.960
C0J52_03585	C0J52_13786	A0A2P8YVF5	A0A2P8YNB3	Uncharacterized protein.	Uncharacterized protein.	0.973
C0J52_03585	SAMM50	A0A2P8YVF5	A0A2P8Y8G2	Uncharacterized protein.	Sorting and assembly machinery component 50.	0.496
C0J52_03585	timm23	A0A2P8YVF5	A0A2P8YW01	Uncharacterized protein.	Mitochondrial import inner membrane translocase subunit Tim23.	0.498
C0J52_06655	C0J52_03585	A0A2P8Z114	A0A2P8YVF5	Uncharacterized protein.	Uncharacterized protein.	0.870
C0J52_06655	C0J52_07190	A0A2P8Z114	A0A2P8Y954	Uncharacterized protein.	Uncharacterized protein.	0.993
C0J52_06655	C0J52_11507	A0A2P8Z114	A0A2P8XTL1	Uncharacterized protein.	Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.	0.806
C0J52_06655	C0J52_12064	A0A2P8Z114	A0A2P8YPF6	Uncharacterized protein.	Uncharacterized protein.	0.982
C0J52_06655	C0J52_13786	A0A2P8Z114	A0A2P8YNB3	Uncharacterized protein.	Uncharacterized protein.	0.988