STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Sugp1SURP and G-patch domain-containing protein 1. (450 aa)    
Predicted Functional Partners:
Dhx15
Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
   
 0.995
C0J52_22991
Uncharacterized protein.
   
 0.975
Rbm17
Splicing factor 45.
   
 
 0.975
C0J52_13031
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
    
 
 0.964
Sf1
Splicing factor 1.
   
 0.802
C0J52_13266
PWI domain-containing protein.
   
 
 0.769
C0J52_22973
Uncharacterized protein.
    
 
 0.765
C0J52_27288
Uncharacterized protein.
    
 
 0.765
C0J52_11842
Chitin-binding type-2 domain-containing protein.
    
 
 0.765
RBM39
RNA-binding protein 39.
   
  0.739
Your Current Organism:
Blattella germanica
NCBI taxonomy Id: 6973
Other names: B. germanica, German cockroach
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.