STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CcnkCyclin-K; Belongs to the cyclin family. (429 aa)    
Predicted Functional Partners:
C0J52_03602
Protein kinase domain-containing protein.
    
 0.999
cdk9
Cyclin-dependent kinase 9; Belongs to the protein kinase superfamily.
   
 0.987
Lhx5
LIM/homeobox protein Lhx5.
    
   0.957
CNOT2
CCR4-NOT transcription complex subunit 2.
   
   0.951
supt4h1
Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.
    
 0.931
C0J52_03484
CPSF_A domain-containing protein.
    
 
 0.920
C0J52_24493
CYCLIN domain-containing protein; Belongs to the cyclin family.
     
 0.909
Cbp80
Nuclear cap-binding protein subunit 1.
   
 0.909
C0J52_26648
Uncharacterized protein.
   
 0.908
C0J52_27949
Uncharacterized protein.
   
 0.908
Your Current Organism:
Blattella germanica
NCBI taxonomy Id: 6973
Other names: B. germanica, German cockroach
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