Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C0J52_00830 | C0J52_06198 | A0A2P8Y1G8 | A0A2P8YKW1 | Uncharacterized protein. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.986 |
C0J52_00830 | C0J52_11618 | A0A2P8Y1G8 | A0A2P8Y879 | Uncharacterized protein. | Uncharacterized protein. | 0.999 |
C0J52_00830 | CRCP | A0A2P8Y1G8 | A0A2P8YR01 | Uncharacterized protein. | DNA-directed RNA polymerase III subunit RPC9. | 0.999 |
C0J52_00830 | POLR1B | A0A2P8Y1G8 | A0A2P8XIL6 | Uncharacterized protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.977 |
C0J52_00830 | POLR2E | A0A2P8Y1G8 | A0A2P8Y6J6 | Uncharacterized protein. | DNA-directed RNA polymerases I. | 0.998 |
C0J52_00830 | POLR3C | A0A2P8Y1G8 | A0A2P8YG11 | Uncharacterized protein. | DNA-directed RNA polymerase III subunit RPC3. | 0.999 |
C0J52_00830 | POLR3H | A0A2P8Y1G8 | A0A2P8YEM6 | Uncharacterized protein. | DNA-directed RNA polymerase III subunit RPC8. | 0.999 |
C0J52_00830 | Polr1c | A0A2P8Y1G8 | A0A2P8YAQ7 | Uncharacterized protein. | DNA-directed RNA polymerases I and III subunit RPAC1. | 0.999 |
C0J52_00830 | Polr3f | A0A2P8Y1G8 | A0A2P8YEL0 | Uncharacterized protein. | DNA-directed RNA polymerase III subunit RPC6. | 0.999 |
C0J52_00830 | Rpb10 | A0A2P8Y1G8 | A0A2P8YTY8 | Uncharacterized protein. | DNA-directed RNA polymerases I. | 0.996 |
C0J52_06198 | C0J52_00830 | A0A2P8YKW1 | A0A2P8Y1G8 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.986 |
C0J52_06198 | C0J52_11618 | A0A2P8YKW1 | A0A2P8Y879 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Uncharacterized protein. | 0.969 |
C0J52_06198 | CRCP | A0A2P8YKW1 | A0A2P8YR01 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase III subunit RPC9. | 0.979 |
C0J52_06198 | POLR1B | A0A2P8YKW1 | A0A2P8XIL6 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
C0J52_06198 | POLR2E | A0A2P8YKW1 | A0A2P8Y6J6 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerases I. | 0.999 |
C0J52_06198 | POLR3C | A0A2P8YKW1 | A0A2P8YG11 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase III subunit RPC3. | 0.987 |
C0J52_06198 | POLR3H | A0A2P8YKW1 | A0A2P8YEM6 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase III subunit RPC8. | 0.986 |
C0J52_06198 | Polr1c | A0A2P8YKW1 | A0A2P8YAQ7 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerases I and III subunit RPAC1. | 0.999 |
C0J52_06198 | Polr3f | A0A2P8YKW1 | A0A2P8YEL0 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase III subunit RPC6. | 0.989 |
C0J52_06198 | Rpb10 | A0A2P8YKW1 | A0A2P8YTY8 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerases I. | 0.999 |
page 1 of 6