STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0J52_20023Rab-GAP TBC domain-containing protein. (894 aa)    
Predicted Functional Partners:
Gabarap
Gamma-aminobutyric acid receptor-associated protein.
   
 0.913
RAB9A
Ras-related protein Rab-9A.
   
 0.907
Fis1
Mitochondrial fission 1 protein; Involved in the fragmentation of the mitochondrial network and its perinuclear clustering.
    
 0.898
COS41.2
Putative Ras-related protein Rab-33.
     
 0.841
MAP1LC3C
Microtubule-associated proteins 1A/1B light chain 3C.
   
 0.751
RAB43
Ras-related protein Rab-43.
     
 0.695
RAB1A
Ras-related protein Rab-1A.
     
 0.640
rab4b
Ras-related protein Rab-4B.
   
 0.608
C0J52_21437
Uncharacterized protein.
     
 0.601
Rab40c
Ras-related protein Rab-40C.
   
 0.598
Your Current Organism:
Blattella germanica
NCBI taxonomy Id: 6973
Other names: B. germanica, German cockroach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.