STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0J52_03931Uncharacterized protein. (599 aa)    
Predicted Functional Partners:
Prpf3
U4/U6 small nuclear ribonucleoprotein Prp3.
   
   0.871
PRPF4
U4/U6 small nuclear ribonucleoprotein Prp4.
    
   0.752
March6
E3 ubiquitin-protein ligase MARCH6.
   
  
 0.651
Arfrp1
ADP-ribosylation factor-related protein 1.
   
  
 0.568
dnajc10
DnaJ subfamily C member 10.
   
  
 0.556
Dhx15
Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15.
   
   0.537
C0J52_06195
Uncharacterized protein.
      
 0.482
smu1
WD40 repeat-containing protein SMU1.
      
 0.461
C0J52_22466
Uncharacterized protein.
      
 0.422
C0J52_11739
WD_REPEATS_REGION domain-containing protein.
    
   0.418
Your Current Organism:
Blattella germanica
NCBI taxonomy Id: 6973
Other names: B. germanica, German cockroach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.