STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NCLNNicalin. (422 aa)    
Predicted Functional Partners:
Ccdc47
Coiled-coil domain-containing protein 47.
    
 
 0.975
tmco1
Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling.
   
 
 0.967
tmem147
Transmembrane protein 147.
    
 
 0.963
Sec61a2
Protein transport protein Sec61 subunit alpha isoform 2.
   
 
 0.953
RpL19
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
    
   0.916
SEC61B
Protein transport protein Sec61 subunit beta.
    
   0.900
RpL11
60S ribosomal protein L11; Belongs to the universal ribosomal protein uL5 family.
    
 
 0.898
Rpl27
60S ribosomal protein L27; Belongs to the eukaryotic ribosomal protein eL27 family.
    
   0.896
RpL9
60S ribosomal protein L9.
    
   0.896
RpL23
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
    
   0.896
Your Current Organism:
Blattella germanica
NCBI taxonomy Id: 6973
Other names: B. germanica, German cockroach
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.