RAE1 protein (Blattella germanica) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

RAE1

mRNA export factor. (362 aa)

Predicted Functional Partners:

C0J52_23222

0.997

C0J52_23226

0.997

C0J52_14644

0.995

C0J52_15903

0.994

Nxf1

0.994

C0J52_04659

0.992

C0J52_10238

0.984

C0J52_08912

0.976

Nup54

0.971

Nup85

0.962

Your Current Organism:

Blattella germanica

NCBI taxonomy Id: 6973
Other names: B. germanica, German cockroach

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C0J52_04659	C0J52_08912	A0A2P8Z9X6	A0A2P8YWY6	Uncharacterized protein.	Uncharacterized protein.	0.974
C0J52_04659	C0J52_10238	A0A2P8Z9X6	A0A2P8YCA5	Uncharacterized protein.	Uncharacterized protein.	0.945
C0J52_04659	C0J52_14644	A0A2P8Z9X6	A0A2P8Y4U9	Uncharacterized protein.	Uncharacterized protein.	0.991
C0J52_04659	C0J52_15903	A0A2P8Z9X6	A0A2P8YQA5	Uncharacterized protein.	Uncharacterized protein.	0.868
C0J52_04659	C0J52_23222	A0A2P8Z9X6	A0A2P8Y233	Uncharacterized protein.	Uncharacterized protein.	0.945
C0J52_04659	C0J52_23226	A0A2P8Z9X6	A0A2P8Y237	Uncharacterized protein.	Uncharacterized protein.	0.945
C0J52_04659	Nup54	A0A2P8Z9X6	A0A2P8YZC0	Uncharacterized protein.	Putative nucleoporin Nup54.	0.981
C0J52_04659	Nup85	A0A2P8Z9X6	A0A2P8YJZ7	Uncharacterized protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.957
C0J52_04659	Nxf1	A0A2P8Z9X6	A0A2P8ZMU2	Uncharacterized protein.	Nuclear RNA export factor 1.	0.868
C0J52_04659	RAE1	A0A2P8Z9X6	A0A2P8YX52	Uncharacterized protein.	mRNA export factor.	0.992
C0J52_08912	C0J52_04659	A0A2P8YWY6	A0A2P8Z9X6	Uncharacterized protein.	Uncharacterized protein.	0.974
C0J52_08912	C0J52_10238	A0A2P8YWY6	A0A2P8YCA5	Uncharacterized protein.	Uncharacterized protein.	0.950
C0J52_08912	C0J52_14644	A0A2P8YWY6	A0A2P8Y4U9	Uncharacterized protein.	Uncharacterized protein.	0.995
C0J52_08912	C0J52_15903	A0A2P8YWY6	A0A2P8YQA5	Uncharacterized protein.	Uncharacterized protein.	0.976
C0J52_08912	C0J52_23222	A0A2P8YWY6	A0A2P8Y233	Uncharacterized protein.	Uncharacterized protein.	0.958
C0J52_08912	C0J52_23226	A0A2P8YWY6	A0A2P8Y237	Uncharacterized protein.	Uncharacterized protein.	0.958
C0J52_08912	Nup54	A0A2P8YWY6	A0A2P8YZC0	Uncharacterized protein.	Putative nucleoporin Nup54.	0.994
C0J52_08912	Nup85	A0A2P8YWY6	A0A2P8YJZ7	Uncharacterized protein.	Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).	0.994
C0J52_08912	Nxf1	A0A2P8YWY6	A0A2P8ZMU2	Uncharacterized protein.	Nuclear RNA export factor 1.	0.976
C0J52_08912	RAE1	A0A2P8YWY6	A0A2P8YX52	Uncharacterized protein.	mRNA export factor.	0.976