STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C0J52_06595Uncharacterized protein. (469 aa)    
Predicted Functional Partners:
SAMM50
Sorting and assembly machinery component 50.
    
 
 0.782
C0J52_15293
RAP domain-containing protein.
    
 0.681
CSK2A
Casein kinase II subunit alpha; Belongs to the protein kinase superfamily.
    
 0.681
Slc39a11
Zinc transporter ZIP11.
   
 
 0.570
C0J52_07190
Uncharacterized protein.
   
 
 0.541
Marf
Transmembrane GTPase Marf; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
     
 0.488
slc39a9-b
Zinc transporter ZIP9-B.
    
 
 0.476
shi_2
Dynamin.
     
 0.443
shi_0
Dynamin; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
     
 0.443
DNM1L
Dynamin-1-like protein; Belongs to the TRAFAC class dynamin-like GTPase superfamily. Dynamin/Fzo/YdjA family.
     
 0.443
Your Current Organism:
Blattella germanica
NCBI taxonomy Id: 6973
Other names: B. germanica, German cockroach
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